formals() function in R
06 Jun 2016A simple way to access the list of parameters a function will accept [if it uses match.arg() which it should]
R> formals(makeTxDbFromBiomart)
$biomart
[1] "ENSEMBL_MART_ENSEMBL"
$dataset
[1] "hsapiens_gene_ensembl"
$transcript_ids
NULL
$circ_seqs
DEFAULT_CIRC_SEQS
$filter
NULL
$id_prefix
[1] "ensembl_"
$host
[1] "www.ensembl.org"
$port
[1] 80
$taxonomyId
[1] NA
$miRBaseBuild
[1] NA